EnhancerDB
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  3. rs555370739[chr1:23431238]
Enhancers that have rs555370739[chr1:23431238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23421969 23432217 enh11605
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555370739[chr1:23431238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23431229 23431244 SOX21 JASPAR yes 27412968
chr1 23431233 23431243 HOXA13 JASPAR yes 27412969
chr1 23431233 23431243 HOXB13 JASPAR yes 27412970
chr1 23431233 23431243 HOXD13 JASPAR yes 27412971
chr1 23431233 23431244 HOXA10 JASPAR yes 27412972
chr1 23431234 23431243 CDX1 JASPAR yes 27412973
chr1 23431234 23431245 CDX2 JASPAR yes 27412974
Genes associated with rs555370739[chr1:23431238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More