EnhancerDB
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  3. rs555409620[chr15:67177898]
Enhancers that have rs555409620[chr15:67177898]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 67152440 67182466 enh3668
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555409620[chr15:67177898]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 67170223 67183024 ZBTB33 GTRD no Lung (A549) 108148708
chr15 67171287 67181106 ZBTB33 GTRD no Lung (A549) 108148709
chr15 67177395 67179187 TEF1 GTRD no Bone (Osteoblast) 21661644
chr15 67177880 67177898 RARA JASPAR yes 24185315
chr15 67177888 67177898 SP1 JASPAR yes 24185316
chr15 67177894 67177900 SP1 TRANSFAC yes 24185318
chr15 67177894 67177904 SP1 JASPAR yes 24185319
Genes associated with rs555409620[chr15:67177898], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More