EnhancerDB
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  3. rs555486498[chr2:227526853]
Enhancers that have rs555486498[chr2:227526853]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227505953 227529050 enh19283
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 227526564 227526855 vista34997
VISTA
Transcript factors that have rs555486498[chr2:227526853]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227526548 227526948 FOS UCSC Txn Factor no Conserved 108435474
chr2 227526642 227526902 FOSL2 UCSC Txn Factor no Conserved 108435475
chr2 227526851 227526864 SMAD2 JASPAR yes 22221084
chr2 227526851 227526864 SMAD2 JASPAR yes 81480500
Genes associated with rs555486498[chr2:227526853], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More