EnhancerDB
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  3. rs555507503[chr1:12609621]
Enhancers that have rs555507503[chr1:12609621]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12597605 12619763 enh11515
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs555507503[chr1:12609621]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12606847 12611860 ZBTB33 GTRD no Lung (A549) 107802126
chr1 12609608 12609627 RFX2 JASPAR yes 26832590
chr1 12609612 12609628 RFX2 JASPAR yes 26832591
chr1 12609612 12609628 RFX3 JASPAR yes 26832592
chr1 12609612 12609628 RFX4 JASPAR yes 26832593
chr1 12609612 12609628 RFX5 JASPAR yes 26832594
chr1 12609613 12609632 RFX2 JASPAR yes 26832595
chr1 12609615 12609630 RFX5 JASPAR yes 26832596
Genes associated with rs555507503[chr1:12609621], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More