EnhancerDB
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  3. rs555533530[chr3:188025149]
Enhancers that have rs555533530[chr3:188025149]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 187996529 188025195 enh48785
Liver Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555533530[chr3:188025149]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 188025144 188025155 ESRRB JASPAR yes 8470251
chr3 188025147 188025157 POU6F2 JASPAR yes 8470252
chr3 188025148 188025158 GSX2 JASPAR yes 8470253
chr3 188025148 188025159 HOXC11 JASPAR yes 8470254
chr3 188025148 188025159 HOXC13 JASPAR yes 8470255
chr3 188025149 188025157 NKX6-1 JASPAR yes 8470256
chr3 188025149 188025157 NKX6-2 JASPAR yes 8470257
chr3 188025149 188025159 HOXC10 JASPAR yes 8470258
chr3 188025149 188025159 HOXD13 JASPAR yes 8470259
Genes associated with rs555533530[chr3:188025149], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More