EnhancerDB
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  3. rs555550066[chr12:65050184]
Enhancers that have rs555550066[chr12:65050184]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555550066[chr12:65050184]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65050173 65050189 SOX4 JASPAR yes 121421848
chr12 65050174 65050189 SOX21 JASPAR yes 121421849
chr12 65050174 65050190 SOX4 JASPAR yes 121421850
chr12 65050175 65050185 BARHL2 JASPAR yes 121421851
chr12 65050179 65050189 MNX1 JASPAR yes 121421853
chr12 65050180 65050188 BARX1 JASPAR yes 121421854
chr12 65050183 65050192 SRY JASPAR yes 121421855
Genes associated with rs555550066[chr12:65050184], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More