EnhancerDB
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  3. rs555592941[chr17:57907766]
Enhancers that have rs555592941[chr17:57907766]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57900714 57910675 enh4507
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555592941[chr17:57907766]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57897794 57907832 ZNF143 GTRD no Epithelial (MCF-7) 21775983
chr17 57897794 57907832 ZNF143 GTRD no Epithelial (MCF-7) 108277660
chr17 57897794 57907832 ZNF143 GTRD no Epithelial (MCF-7) 108277661
chr17 57897794 57907832 ZNF143 GTRD no Epithelial (MCF-7) 108277662
chr17 57897794 57907832 ZNF143 GTRD no Epithelial (MCF-7) 108277663
chr17 57897794 57907832 ZNF143 GTRD no Epithelial (MCF-7) 108277664
chr17 57905252 57907881 POLR2A UCSC Txn Factor no Conserved 108277933
chr17 57905252 57907881 POLR2A UCSC Txn Factor no Conserved 108277934
chr17 57905252 57907881 POLR2A UCSC Txn Factor no Conserved 108277935
chr17 57907397 57907841 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21776385
chr17 57907397 57907841 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108278231
chr17 57907428 57907784 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776386
chr17 57907428 57907784 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108278232
chr17 57907762 57907783 IRF1 JASPAR yes 55086722
Genes associated with rs555592941[chr17:57907766], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More