EnhancerDB
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  3. rs555598146[chr1:205260969]
Enhancers that have rs555598146[chr1:205260969]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205259785 205270135 enh12589
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555598146[chr1:205260969]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205260611 205264392 ZNF274 GTRD no Bone Marrow (K562) 107861587
chr1 205260611 205264392 ZNF274 GTRD no Bone Marrow (K562) 107861588
chr1 205260952 205260972 RREB1 JASPAR yes 34752174
chr1 205260954 205260974 RREB1 JASPAR yes 34752175
chr1 205260955 205260975 RREB1 JASPAR yes 34752177
chr1 205260957 205260977 RREB1 JASPAR yes 34752178
chr1 205260958 205260970 ZBTB7C JASPAR yes 34752179
chr1 205260958 205260978 RREB1 JASPAR yes 34752180
chr1 205260959 205260979 RREB1 JASPAR yes 34752181
chr1 205260961 205260981 RREB1 JASPAR yes 34752182
chr1 205260962 205260982 RREB1 JASPAR yes 34752183
chr1 205260966 205260986 RREB1 JASPAR yes 34752184
Genes associated with rs555598146[chr1:205260969], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More