EnhancerDB
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  3. rs555641285[chr17:60256228]
Enhancers that have rs555641285[chr17:60256228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60253851 60272895 enh17275
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
chr17 60255991 60256253 vista25428
VISTA
Transcript factors that have rs555641285[chr17:60256228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777818
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777819
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280259
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280260
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280261
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280262
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280263
chr17 60255761 60256291 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21777906
chr17 60255761 60256291 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108280362
chr17 60255800 60256316 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21777907
chr17 60255800 60256316 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108280363
chr17 60255832 60256740 ZBTB33 GTRD no Brain (SK-N-SH) 108280364
chr17 60255952 60256808 ZBTB33 GTRD no Brain (SK-N-SH) 108280365
chr17 60255962 60256372 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108280367
chr17 60255970 60256310 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21777909
chr17 60255970 60256310 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108280368
chr17 60256001 60256321 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21777910
chr17 60256001 60256321 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108280369
chr17 60256036 60256887 ZBTB33 GTRD no Brain (SK-N-SH) 108280370
chr17 60256153 60256640 ZBTB33 GTRD no Brain (SK-N-SH) 108280371
chr17 60256193 60256533 ZNF274 GTRD no Bone Marrow (K562) 21777911
chr17 60256193 60256533 ZNF274 GTRD no Bone Marrow (K562) 108280372
chr17 60256219 60256233 STAT1 JASPAR yes 21269689
chr17 60256219 60256233 STAT1 JASPAR yes 55190172
Genes associated with rs555641285[chr17:60256228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More