EnhancerDB
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  3. rs555685120[chr1:154391687]
Enhancers that have rs555685120[chr1:154391687]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 154391539 154392211 vista3373
VISTA
Transcript factors that have rs555685120[chr1:154391687]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154390691 154392004 P63 GTRD no Skin (Keratinocyte) 21340388
chr1 154390691 154392004 P63 GTRD no Skin (Keratinocyte) 107832545
chr1 154390706 154392011 P63 GTRD no Skin (Keratinocyte) 21340389
chr1 154390706 154392011 P63 GTRD no Skin (Keratinocyte) 107832546
chr1 154390790 154392109 P63 GTRD no Skin (Keratinocyte) 21340390
chr1 154390790 154392109 P63 GTRD no Skin (Keratinocyte) 107832547
chr1 154390907 154391950 P63 GTRD no Skin (Keratinocyte) 21340391
chr1 154390907 154391950 P63 GTRD no Skin (Keratinocyte) 107832548
chr1 154391399 154391803 ZNF274 GTRD no Bone Marrow (K562) 107832550
chr1 154391400 154391750 ZNF274 GTRD no Bone Marrow (K562) 107832551
Genes associated with rs555685120[chr1:154391687], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More