EnhancerDB
  1. Home
  2. SNP
  3. rs555690856[chr1:171410731]
Enhancers that have rs555690856[chr1:171410731]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs555690856[chr1:171410731]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171410422 171410762 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349730
chr1 171410446 171410776 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349731
chr1 171410478 171410742 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349732
chr1 171410498 171410754 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21349733
chr1 171410528 171410984 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349734
chr1 171410617 171410973 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349737
chr1 171410722 171410735 EOMES JASPAR yes 33081579
chr1 171410724 171410734 TBR1 JASPAR yes 33081580
chr1 171410729 171411185 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349738
Genes associated with rs555690856[chr1:171410731], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More