EnhancerDB
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  3. rs555838952[chr16:88832004]
Enhancers that have rs555838952[chr16:88832004]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555838952[chr16:88832004]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88831489 88832059 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21736936
chr16 88831489 88832059 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108223390
chr16 88831649 88832296 TCF7L2 GTRD no Colon (HCT116) 21736937
chr16 88831649 88832296 TCF7L2 GTRD no Colon (HCT116) 108223391
chr16 88831653 88832606 ZNF143 GTRD no Epithelial (MCF-7) 21736938
chr16 88831653 88832606 ZNF143 GTRD no Epithelial (MCF-7) 108223392
chr16 88831986 88832005 REST JASPAR yes 12301713
chr16 88832004 88832016 INSM1 JASPAR yes 12301714
Genes associated with rs555838952[chr16:88832004], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More