EnhancerDB
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  3. rs555855822[chr12:125178776]
Enhancers that have rs555855822[chr12:125178776]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555855822[chr12:125178776]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125178762 125178777 FOXA1 JASPAR yes 124409695
chr12 125178762 125178778 POU4F2 JASPAR yes 124409696
chr12 125178762 125178778 POU4F3 JASPAR yes 124409697
chr12 125178764 125178776 FOXI1 JASPAR yes 124409701
chr12 125178766 125178780 POU4F1 JASPAR yes 124409702
chr12 125178766 125178782 POU4F2 JASPAR yes 124409703
chr12 125178766 125178782 POU4F3 JASPAR yes 124409704
chr12 125178768 125178779 CDX2 JASPAR yes 124409705
chr12 125178769 125178780 HOXA10 JASPAR yes 124409706
chr12 125178770 125178779 CDX1 JASPAR yes 124409707
chr12 125178770 125178780 HOXA13 JASPAR yes 124409708
chr12 125178770 125178780 HOXB13 JASPAR yes 124409709
chr12 125178770 125178780 HOXD13 JASPAR yes 124409710
chr12 125178772 125178793 IRF1 JASPAR yes 124409711
chr12 125178774 125178780 TBP TRANSFAC yes 124409712
chr12 125178775 125178789 ONECUT3 JASPAR yes 124409713
Genes associated with rs555855822[chr12:125178776], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More