EnhancerDB
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  3. rs555875782[chr1:154403606]
Enhancers that have rs555875782[chr1:154403606]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555875782[chr1:154403606]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154403076 154404287 ZNF274 GTRD no Blood (GM12878) 21340445
chr1 154403076 154404287 ZNF274 GTRD no Blood (GM12878) 107832613
chr1 154403595 154403616 ZNF263 JASPAR yes 32292130
chr1 154403599 154403609 SP1 JASPAR yes 32292131
chr1 154403601 154403606 SP1 TRANSFAC yes 32292132
chr1 154403601 154403612 E2F4 JASPAR yes 32292133
chr1 154403602 154403607 SP1 TRANSFAC yes 32292134
chr1 154403602 154403608 SP1 TRANSFAC yes 32292135
chr1 154403605 154403626 ZNF263 JASPAR yes 32292136
Genes associated with rs555875782[chr1:154403606], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More