EnhancerDB
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  3. rs555961716[chr3:153004220]
Enhancers that have rs555961716[chr3:153004220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 152999949 153013375 enh21048
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555961716[chr3:153004220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 153004200 153004221 IRF1 JASPAR yes 6757491
chr3 153004202 153004222 RREB1 JASPAR yes 6757492
chr3 153004205 153004220 FOXP1 JASPAR yes 6757494
chr3 153004207 153004227 RREB1 JASPAR yes 6757495
chr3 153004209 153004224 FOXP1 JASPAR yes 6757496
chr3 153004210 153004221 FOXA1 JASPAR yes 6757497
chr3 153004210 153004225 FOXA1 JASPAR yes 6757498
chr3 153004211 153004223 FOXC2 JASPAR yes 6757499
chr3 153004212 153004224 FOXI1 JASPAR yes 6757500
chr3 153004216 153004228 FOXI1 JASPAR yes 6757501
chr3 153004216 153004236 RREB1 JASPAR yes 6757502
chr3 153004217 153004231 FOXF2 JASPAR yes 6757503
chr3 153004217 153004232 FOXP1 JASPAR yes 6757504
chr3 153004219 153004231 FOXC2 JASPAR yes 6757505
chr3 153004220 153004231 FOXP2 JASPAR yes 6757506
chr3 153004220 153004232 FOXI1 JASPAR yes 6757507
Genes associated with rs555961716[chr3:153004220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More