EnhancerDB
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  3. rs556019769[chr1:23454494]
Enhancers that have rs556019769[chr1:23454494]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs556019769[chr1:23454494]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23454488 23454500 HES5 JASPAR yes 27416144
chr1 23454488 23454500 HES7 JASPAR yes 27416145
chr1 23454488 23454504 T JASPAR yes 27416146
chr1 23454489 23454499 BHLHE40 JASPAR yes 27416147
chr1 23454489 23454499 BHLHE41 JASPAR yes 27416148
chr1 23454489 23454499 HEY1 JASPAR yes 27416149
chr1 23454489 23454499 HEY2 JASPAR yes 27416150
chr1 23454489 23454499 MAX JASPAR yes 27416151
chr1 23454489 23454499 MNT JASPAR yes 27416152
chr1 23454489 23454499 TFE3 JASPAR yes 27416153
chr1 23454489 23454499 TFEB JASPAR yes 27416154
chr1 23454491 23454496 MYC TRANSFAC yes 27416155
chr1 23454491 23454496 USF1 TRANSFAC yes 27416156
chr1 23454491 23454496 USF2 TRANSFAC yes 27416157
Genes associated with rs556019769[chr1:23454494], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More