EnhancerDB
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  3. rs556053397[chr17:2755627]
Enhancers that have rs556053397[chr17:2755627]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs556053397[chr17:2755627]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2755616 2755636 RREB1 JASPAR yes 52777454
chr17 2755619 2755640 ZNF263 JASPAR yes 52777455
chr17 2755620 2755640 RREB1 JASPAR yes 52777456
chr17 2755621 2755627 MAZ TRANSFAC yes 52777457
chr17 2755621 2755641 RREB1 JASPAR yes 52777458
chr17 2755622 2755642 RREB1 JASPAR yes 52777459
chr17 2755622 2755643 ZNF263 JASPAR yes 52777460
chr17 2755623 2755633 ZNF740 JASPAR yes 52777461
chr17 2755623 2755643 RREB1 JASPAR yes 52777462
chr17 2755624 2755644 RREB1 JASPAR yes 52777463
chr17 2755625 2755635 SP1 JASPAR yes 52777464
chr17 2755625 2755646 ZNF263 JASPAR yes 52777465
chr17 2755626 2755646 RREB1 JASPAR yes 52777466
chr17 2755627 2755647 RREB1 JASPAR yes 52777467
Genes associated with rs556053397[chr17:2755627], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More