EnhancerDB
  1. Home
  2. SNP
  3. rs556175925[chr1:52031647]
Enhancers that have rs556175925[chr1:52031647]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52027839 52037840 enh360
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Heart
Transcript factors that have rs556175925[chr1:52031647]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52031407 52034455 ZNF274 GTRD no Blood (GM12878) 107803247
chr1 52031462 52034298 ZNF274 GTRD no Blood (GM12878) 107803248
chr1 52031472 52034382 ZNF274 GTRD no Bone Marrow (K562) 107803249
chr1 52031505 52034179 ZNF274 GTRD no Blood (GM12878) 107803250
chr1 52031518 52034339 ZNF274 GTRD no Blood (GM12878) 107803251
chr1 52031548 52034559 ZNF274 GTRD no Bone Marrow (K562) 107803252
chr1 52031643 52031658 JUND JASPAR yes 28851573
chr1 52031644 52031654 POU6F2 JASPAR yes 28851574
chr1 52031645 52031660 NFYB JASPAR yes 28851575
chr1 52031647 52031663 NFYA JASPAR yes 28851576
Genes associated with rs556175925[chr1:52031647], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More