EnhancerDB
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  3. rs556211003[chr1:234625363]
Enhancers that have rs556211003[chr1:234625363]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556211003[chr1:234625363]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234623930 234625736 ZNF274 GTRD no Bone Marrow (K562) 21393179
chr1 234623930 234625736 ZNF274 GTRD no Bone Marrow (K562) 107879987
chr1 234623930 234625736 ZNF274 GTRD no Bone Marrow (K562) 107879988
chr1 234624018 234625466 ZNF274 GTRD no Bone Marrow (K562) 21393190
chr1 234624018 234625466 ZNF274 GTRD no Bone Marrow (K562) 107879999
chr1 234624058 234625695 ZNF143 GTRD no Epithelial (MCF-7) 21393194
chr1 234624058 234625695 ZNF143 GTRD no Epithelial (MCF-7) 107880003
chr1 234624058 234625695 ZNF143 GTRD no Epithelial (MCF-7) 107880004
chr1 234624358 234625542 AR GTRD no Prostate (PC-3) 21393203
chr1 234624358 234625542 AR GTRD no Prostate (PC-3) 107880005
chr1 234624504 234625387 ZBTB33 GTRD no Brain (SK-N-SH) 21393206
chr1 234625142 234625372 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21393222
chr1 234625149 234625409 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21393224
chr1 234625356 234625377 IRF1 JASPAR yes 36277893
chr1 234625358 234625373 STAT2 JASPAR yes 36277894
chr1 234625361 234625376 FOXP1 JASPAR yes 36277895
chr1 234625362 234625377 FOXP1 JASPAR yes 36277896
Genes associated with rs556211003[chr1:234625363], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More