EnhancerDB
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  3. rs556216553[chr16:85269872]
Enhancers that have rs556216553[chr16:85269872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556216553[chr16:85269872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85269501 85269950 TCF7L2 GTRD no Colon (HCT116) 21721788
chr16 85269575 85271034 ZBTB33 GTRD no Brain (SK-N-SH) 21721789
chr16 85269774 85270034 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721790
chr16 85269805 85270081 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721791
chr16 85269817 85269982 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721792
chr16 85269837 85270073 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721793
chr16 85269854 85269874 ESR1 JASPAR yes 12036747
chr16 85269859 85269874 ESR2 JASPAR yes 12036748
chr16 85269859 85269878 REST JASPAR yes 12036749
chr16 85269869 85270037 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721794
chr16 85269872 85269886 ZIC1 JASPAR yes 12036751
chr16 85269872 85269887 ZIC4 JASPAR yes 12036752
Genes associated with rs556216553[chr16:85269872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More