EnhancerDB
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  3. rs556295970[chr2:102324138]
Enhancers that have rs556295970[chr2:102324138]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102318065 102395755 enh5746
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556295970[chr2:102324138]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102324120 102324141 REST JASPAR yes 75828684
chr2 102324136 102324157 IRF1 JASPAR yes 75828685
chr2 102324138 102324153 STAT2 JASPAR yes 75828686
Genes associated with rs556295970[chr2:102324138], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More