EnhancerDB
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  3. rs556306233[chr19:5969276]
Enhancers that have rs556306233[chr19:5969276]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5941853 5970935 enh4982
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556306233[chr19:5969276]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5966944 5969366 ZNF274 GTRD no Blood (GM12878) 108376107
chr19 5966944 5969366 ZNF274 GTRD no Blood (GM12878) 108376108
chr19 5967017 5970257 ZNF274 GTRD no Bone Marrow (K562) 21843756
chr19 5967017 5970257 ZNF274 GTRD no Bone Marrow (K562) 108376111
chr19 5967017 5970257 ZNF274 GTRD no Bone Marrow (K562) 108376112
chr19 5967423 5969490 ZNF274 GTRD no Bone Marrow (K562) 21843759
chr19 5967423 5969490 ZNF274 GTRD no Bone Marrow (K562) 108376125
chr19 5967423 5969490 ZNF274 GTRD no Bone Marrow (K562) 108376126
chr19 5967707 5969613 ZNF274 GTRD no Liver (HepG2) 21843773
chr19 5967707 5969613 ZNF274 GTRD no Liver (HepG2) 108376156
chr19 5967707 5969613 ZNF274 GTRD no Liver (HepG2) 108376157
chr19 5967727 5970096 ZNF274 GTRD no Liver (HepG2) 21843775
chr19 5967727 5970096 ZNF274 GTRD no Liver (HepG2) 108376159
chr19 5967727 5970096 ZNF274 GTRD no Liver (HepG2) 108376160
chr19 5967768 5969349 ZNF274 GTRD no Bone Marrow (K562) 21843782
chr19 5967768 5969349 ZNF274 GTRD no Bone Marrow (K562) 108376168
chr19 5967768 5969349 ZNF274 GTRD no Bone Marrow (K562) 108376169
chr19 5967779 5969344 P63 GTRD no Skin (Keratinocyte) 21843784
chr19 5967779 5969344 P63 GTRD no Skin (Keratinocyte) 108376172
chr19 5967779 5969344 P63 GTRD no Skin (Keratinocyte) 108376173
chr19 5967824 5969306 P63 GTRD no Skin (Keratinocyte) 21843790
chr19 5967824 5969306 P63 GTRD no Skin (Keratinocyte) 108376180
chr19 5967824 5969306 P63 GTRD no Skin (Keratinocyte) 108376181
chr19 5967855 5969401 ZNF274 GTRD no Bone Marrow (K562) 21843801
chr19 5967855 5969401 ZNF274 GTRD no Bone Marrow (K562) 108376207
chr19 5967855 5969401 ZNF274 GTRD no Bone Marrow (K562) 108376208
chr19 5967874 5969403 ZNF274 GTRD no Liver (HepG2) 21843807
chr19 5967874 5969403 ZNF274 GTRD no Liver (HepG2) 108376221
chr19 5967874 5969403 ZNF274 GTRD no Liver (HepG2) 108376222
chr19 5967890 5969453 ZNF274 GTRD no Liver (HepG2) 21843812
chr19 5967890 5969453 ZNF274 GTRD no Liver (HepG2) 108376228
chr19 5967890 5969453 ZNF274 GTRD no Liver (HepG2) 108376229
chr19 5968532 5969354 ZNF274 GTRD no Bone Marrow (K562) 21843886
chr19 5968532 5969354 ZNF274 GTRD no Bone Marrow (K562) 108376329
chr19 5968565 5969351 TCF7L2 GTRD no Colon (HCT116) 21843888
chr19 5968565 5969351 TCF7L2 GTRD no Colon (HCT116) 108376331
chr19 5968570 5969441 ZNF274 GTRD no Liver (HepG2) 21843889
chr19 5968570 5969441 ZNF274 GTRD no Liver (HepG2) 108376332
Genes associated with rs556306233[chr19:5969276], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More