EnhancerDB
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  3. rs556353332[chr12:65076616]
Enhancers that have rs556353332[chr12:65076616]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 65076423 65076649 vista13806
VISTA
Transcript factors that have rs556353332[chr12:65076616]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65076321 65076765 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21552918
chr12 65076321 65076765 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108041937
chr12 65076492 65076638 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21552919
chr12 65076492 65076638 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108041938
chr12 65076616 65076620 YY1 TRANSFAC yes 82422890
chr12 65076616 65076620 YY1 TRANSFAC yes 121426011
Genes associated with rs556353332[chr12:65076616], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More