EnhancerDB
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  3. rs556382883[chr16:88843168]
Enhancers that have rs556382883[chr16:88843168]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556382883[chr16:88843168]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 21736969
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223440
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223441
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223442
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223443
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 21736971
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223445
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223446
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223447
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223448
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 21736980
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 108223459
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 108223460
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 108223461
chr16 88843159 88843171 TFAP2A JASPAR yes 12303232
chr16 88843159 88843171 TFAP2B JASPAR yes 12303233
chr16 88843159 88843171 TFAP2C JASPAR yes 12303234
chr16 88843165 88843173 SP1 TRANSFAC yes 12303235
chr16 88843166 88843171 SP1 TRANSFAC yes 12303236
chr16 88843167 88843172 SP1 TRANSFAC yes 12303237
Genes associated with rs556382883[chr16:88843168], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More