EnhancerDB
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  3. rs556414288[chr18:55948540]
Enhancers that have rs556414288[chr18:55948540]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55922865 55949275 enh17739
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs556414288[chr18:55948540]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55948528 55948541 SMAD2 JASPAR yes 110936231
chr18 55948529 55948550 IRF1 JASPAR yes 110936232
chr18 55948534 55948555 IRF1 JASPAR yes 110936233
chr18 55948538 55948553 FOXP1 JASPAR yes 110936234
chr18 55948539 55948554 FOXP1 JASPAR yes 110936235
chr18 55948540 55948555 FOXP1 JASPAR yes 110936236
Genes associated with rs556414288[chr18:55948540], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More