EnhancerDB
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  3. rs55643404[chr17:55547637]
Enhancers that have rs55643404[chr17:55547637]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs55643404[chr17:55547637]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55547625 55547637 POU2F1 JASPAR yes 54958334
chr17 55547626 55547638 POU3F1 JASPAR yes 54958335
chr17 55547626 55547638 POU3F2 JASPAR yes 54958336
chr17 55547634 55547650 POU4F3 JASPAR yes 54958338
chr17 55547635 55547650 FOXA1 JASPAR yes 54958339
chr17 55547636 55547648 FOXI1 JASPAR yes 54958340
chr17 55547636 55547650 POU4F1 JASPAR yes 54958341
chr17 55547636 55547651 FOXP1 JASPAR yes 54958342
chr17 55547636 55547651 HNF1A JASPAR yes 54958343
chr17 55547637 55547649 FOXC2 JASPAR yes 54958344
chr17 55547637 55547651 ONECUT2 JASPAR yes 54958345
chr17 55547637 55547651 ONECUT3 JASPAR yes 54958346
Genes associated with rs55643404[chr17:55547637], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More