EnhancerDB
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  3. rs556438670[chr12:106516253]
Enhancers that have rs556438670[chr12:106516253]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 106512365 106532655 enh29959
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Uterus Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs556438670[chr12:106516253]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 106515879 106516445 ZNF274 GTRD no Bone Marrow (K562) 108055961
chr12 106515983 106516263 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21570210
chr12 106515983 106516263 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108055962
chr12 106516028 106516384 ZNF274 GTRD no Blood (GM12878) 108055963
chr12 106516249 106516269 TP53 JASPAR yes 123491763
Genes associated with rs556438670[chr12:106516253], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More