EnhancerDB
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  3. rs556497620[chr1:10563965]
Enhancers that have rs556497620[chr1:10563965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10562245 10593475 enh59
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556497620[chr1:10563965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10563959 10563974 HNF1A JASPAR yes 26718165
chr1 10563961 10563973 MEF2B JASPAR yes 26718166
Genes associated with rs556497620[chr1:10563965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More