EnhancerDB
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  3. rs55652946[chr6:47058569]
Enhancers that have rs55652946[chr6:47058569]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47048805 47068805 enh23286
Liver Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs55652946[chr6:47058569]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47058560 47058580 TBX19 JASPAR yes 101996240
Genes associated with rs55652946[chr6:47058569], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 46820249 46922680 - GPR116 ENSG00000069122.14 46922680 135889 Stomach 0.0371944 6653