EnhancerDB
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  3. rs55657045[chr5:172292054]
Enhancers that have rs55657045[chr5:172292054]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55657045[chr5:172292054]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172292048 172292069 IRF1 JASPAR yes 67836530
chr5 172292049 172292070 IRF1 JASPAR yes 67836531
chr5 172292050 172292071 IRF1 JASPAR yes 67836532
chr5 172292051 172292066 FOXP1 JASPAR yes 67836533
chr5 172292051 172292072 IRF1 JASPAR yes 67836534
chr5 172292052 172292073 IRF1 JASPAR yes 67836535
chr5 172292053 172292068 FOXP1 JASPAR yes 67836536
chr5 172292053 172292074 IRF1 JASPAR yes 67836537
chr5 172292054 172292069 FOXP1 JASPAR yes 67836538
chr5 172292054 172292075 IRF1 JASPAR yes 67836539
Genes associated with rs55657045[chr5:172292054], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More