EnhancerDB
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  3. rs556594900[chr5:173185711]
Enhancers that have rs556594900[chr5:173185711]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556594900[chr5:173185711]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173185702 173185714 IRF1 JASPAR yes 67901198
chr5 173185702 173185717 HNF4G JASPAR yes 67901199
chr5 173185703 173185717 NR2F1 JASPAR yes 67901200
chr5 173185703 173185717 RXRB JASPAR yes 67901201
chr5 173185703 173185718 HNF4A JASPAR yes 67901202
Genes associated with rs556594900[chr5:173185711], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More