EnhancerDB
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  3. rs55660406[chr1:235108301]
Enhancers that have rs55660406[chr1:235108301]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 235108272 235108467 vista5675
VISTA
Transcript factors that have rs55660406[chr1:235108301]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235103696 235109375 ZNF274 GTRD no Blood (GM12878) 21401778
chr1 235103696 235109375 ZNF274 GTRD no Blood (GM12878) 107884753
chr1 235103696 235109375 ZNF274 GTRD no Blood (GM12878) 107884754
chr1 235103696 235109375 ZNF274 GTRD no Blood (GM12878) 107884755
chr1 235103696 235109375 ZNF274 GTRD no Blood (GM12878) 107884756
chr1 235103696 235109375 ZNF274 GTRD no Blood (GM12878) 107884757
chr1 235103734 235108753 ZNF274 GTRD no Blood (GM12878) 21401781
chr1 235103734 235108753 ZNF274 GTRD no Blood (GM12878) 107884761
chr1 235103734 235108753 ZNF274 GTRD no Blood (GM12878) 107884762
chr1 235103734 235108753 ZNF274 GTRD no Blood (GM12878) 107884763
chr1 235103734 235108753 ZNF274 GTRD no Blood (GM12878) 107884764
chr1 235103760 235108578 ZNF274 GTRD no Liver (HepG2) 21401785
chr1 235103760 235108578 ZNF274 GTRD no Liver (HepG2) 107884768
chr1 235103760 235108578 ZNF274 GTRD no Liver (HepG2) 107884769
chr1 235103760 235108578 ZNF274 GTRD no Liver (HepG2) 107884770
chr1 235103760 235108578 ZNF274 GTRD no Liver (HepG2) 107884771
chr1 235103821 235108569 ZBTB33 GTRD no Lung (A549) 107884778
chr1 235103821 235108569 ZBTB33 GTRD no Lung (A549) 107884779
chr1 235103821 235108569 ZBTB33 GTRD no Lung (A549) 107884780
chr1 235103821 235108569 ZBTB33 GTRD no Lung (A549) 107884781
chr1 235106233 235109371 ZNF274 GTRD no Bone Marrow (K562) 21401979
chr1 235106233 235109371 ZNF274 GTRD no Bone Marrow (K562) 107884861
chr1 235106233 235109371 ZNF274 GTRD no Bone Marrow (K562) 107884862
chr1 235106233 235109371 ZNF274 GTRD no Bone Marrow (K562) 107884863
chr1 235106233 235109371 ZNF274 GTRD no Bone Marrow (K562) 107884864
chr1 235106744 235110177 ZNF274 GTRD no Bone Marrow (K562) 21401999
chr1 235106744 235110177 ZNF274 GTRD no Bone Marrow (K562) 107884870
chr1 235106744 235110177 ZNF274 GTRD no Bone Marrow (K562) 107884871
chr1 235106744 235110177 ZNF274 GTRD no Bone Marrow (K562) 107884872
chr1 235106744 235110177 ZNF274 GTRD no Bone Marrow (K562) 107884873
chr1 235106798 235108541 ZNF274 GTRD no Blood (GM12878) 21402001
chr1 235106798 235108541 ZNF274 GTRD no Blood (GM12878) 107884876
chr1 235106798 235108541 ZNF274 GTRD no Blood (GM12878) 107884877
chr1 235106798 235108541 ZNF274 GTRD no Blood (GM12878) 107884878
chr1 235107010 235108532 ZNF274 GTRD no Blood (GM12878) 21402021
chr1 235107010 235108532 ZNF274 GTRD no Blood (GM12878) 107884899
chr1 235107010 235108532 ZNF274 GTRD no Blood (GM12878) 107884900
chr1 235107010 235108532 ZNF274 GTRD no Blood (GM12878) 107884901
chr1 235107128 235108648 ZNF274 GTRD no Blood (GM12878) 21402025
chr1 235107128 235108648 ZNF274 GTRD no Blood (GM12878) 107884905
chr1 235107128 235108648 ZNF274 GTRD no Blood (GM12878) 107884906
chr1 235107128 235108648 ZNF274 GTRD no Blood (GM12878) 107884907
chr1 235107217 235108537 ZBTB33 GTRD no Lung (A549) 107884911
chr1 235107217 235108537 ZBTB33 GTRD no Lung (A549) 107884912
chr1 235107218 235108671 ZNF274 GTRD no Blood (GM12878) 21402029
chr1 235107218 235108671 ZNF274 GTRD no Blood (GM12878) 107884913
chr1 235107218 235108671 ZNF274 GTRD no Blood (GM12878) 107884914
chr1 235107826 235108816 ZNF274 GTRD no Liver (HepG2) 21402046
chr1 235107826 235108816 ZNF274 GTRD no Liver (HepG2) 107884927
chr1 235107859 235108549 ZNF274 GTRD no Liver (HepG2) 21402048
chr1 235107859 235108549 ZNF274 GTRD no Liver (HepG2) 107884928
chr1 235107942 235108557 ZNF274 GTRD no Blood (GM12878) 21402049
chr1 235107942 235108557 ZNF274 GTRD no Blood (GM12878) 107884929
chr1 235107947 235109256 ZNF274 GTRD no Bone Marrow (K562) 21402050
chr1 235107947 235109256 ZNF274 GTRD no Bone Marrow (K562) 107884930
chr1 235107947 235109256 ZNF274 GTRD no Bone Marrow (K562) 107884931
chr1 235107951 235108710 ZNF274 GTRD no Blood (GM12878) 21402051
chr1 235107951 235108710 ZNF274 GTRD no Blood (GM12878) 107884932
chr1 235108020 235108456 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402052
chr1 235108020 235108456 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884933
chr1 235108105 235108541 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402053
chr1 235108105 235108541 MAX UCSC Txn Factor no Conserved 107884934
chr1 235108105 235108541 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884935
chr1 235108105 235108561 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402054
chr1 235108105 235108561 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107884936
chr1 235108108 235108616 ZNF274 GTRD no Blood (GM12878) 21402055
chr1 235108108 235108616 ZNF274 GTRD no Blood (GM12878) 107884937
chr1 235108114 235108444 ZNF274 GTRD no Blood (GM12878) 21402056
chr1 235108114 235108444 ZNF274 GTRD no Blood (GM12878) 107884938
chr1 235108131 235108532 ZNF274 GTRD no Blood (GM12878) 21402057
chr1 235108131 235108532 ZNF274 GTRD no Blood (GM12878) 107884939
chr1 235108137 235108875 ZNF274 GTRD no Bone Marrow (K562) 21402058
chr1 235108137 235108875 ZNF274 GTRD no Bone Marrow (K562) 107884940
chr1 235108144 235108514 ZNF274 GTRD no Blood (GM12878) 21402059
chr1 235108144 235108514 ZNF274 GTRD no Blood (GM12878) 107884941
chr1 235108158 235108488 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402060
chr1 235108158 235108488 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884942
chr1 235108158 235108555 ZNF274 GTRD no Bone Marrow (K562) 21402061
chr1 235108158 235108555 ZNF274 GTRD no Bone Marrow (K562) 107884943
chr1 235108178 235108502 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402062
chr1 235108178 235108502 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107884944
chr1 235108186 235108496 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402063
chr1 235108186 235108496 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107884945
chr1 235108187 235108407 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402064
chr1 235108187 235108407 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884946
chr1 235108187 235108454 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402065
chr1 235108187 235108454 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107884947
chr1 235108194 235108470 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402066
chr1 235108194 235108470 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884948
chr1 235108211 235108487 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402067
chr1 235108211 235108487 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107884949
chr1 235108213 235108477 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402068
chr1 235108213 235108477 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107884950
chr1 235108231 235108505 ZNF274 GTRD no Blood (GM12878) 21402069
chr1 235108231 235108505 ZNF274 GTRD no Blood (GM12878) 107884951
chr1 235108287 235108305 IRF2 JASPAR yes 36336679
chr1 235108287 235108305 IRF2 JASPAR yes 118486592
chr1 235108295 235108478 ZNF274 GTRD no Blood (GM12878) 21402070
chr1 235108295 235108478 ZNF274 GTRD no Blood (GM12878) 107884952
Genes associated with rs55660406[chr1:235108301], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More