EnhancerDB
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  3. rs556609724[chr5:173191380]
Enhancers that have rs556609724[chr5:173191380]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556609724[chr5:173191380]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173190900 173191601 RPC155 UCSC Txn Factor no Conserved 108537586
chr5 173191296 173191846 TCF7L2 UCSC Txn Factor no Conserved 108537587
chr5 173191378 173191382 NFE TRANSFAC yes 67901953
Genes associated with rs556609724[chr5:173191380], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More