EnhancerDB
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  3. rs55661934[chr3:57026316]
Enhancers that have rs55661934[chr3:57026316]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57012585 57055453 enh7240
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs55661934[chr3:57026316]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57026305 57026317 PKNOX1 JASPAR yes 2619586
chr3 57026305 57026317 PKNOX2 JASPAR yes 2619587
chr3 57026305 57026317 TGIF1 JASPAR yes 2619588
Genes associated with rs55661934[chr3:57026316], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr3 57327727 57530071 - DNAH12 ENSG00000174844.10 57530071 301411 Ovary 0.278753 3791