EnhancerDB
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  3. rs556625937[chr17:65467311]
Enhancers that have rs556625937[chr17:65467311]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs556625937[chr17:65467311]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65467304 65467318 ONECUT2 JASPAR yes 55508156
chr17 65467304 65467318 ONECUT3 JASPAR yes 55508157
chr17 65467307 65467317 CUX1 JASPAR yes 55508158
chr17 65467307 65467317 CUX2 JASPAR yes 55508159
chr17 65467309 65467320 HOXA10 JASPAR yes 55508160
chr17 65467310 65467320 HOXB13 JASPAR yes 55508161
chr17 65467310 65467320 HOXD13 JASPAR yes 55508162
Genes associated with rs556625937[chr17:65467311], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More