EnhancerDB
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  3. rs556657842[chr17:49014187]
Enhancers that have rs556657842[chr17:49014187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556657842[chr17:49014187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49011964 49014278 ZNF274 GTRD no Liver (HepG2) 21771195
chr17 49012251 49014869 ZNF274 GTRD no Liver (HepG2) 21771209
chr17 49012374 49014275 ZNF274 GTRD no Liver (HepG2) 21771219
chr17 49012899 49015098 ZNF143 GTRD no Epithelial (MCF-7) 21771293
chr17 49013165 49015788 TCF7L2 GTRD no Colon (HCT116) 21771298
chr17 49013173 49014851 ZNF274 GTRD no Liver (HepG2) 21771299
chr17 49013180 49015472 TCF7L2 GTRD no Colon (HCT116) 21771300
chr17 49013188 49014207 ZNF274 GTRD no Liver (HepG2) 21771302
chr17 49013194 49016195 ZNF143 GTRD no Epithelial (MCF-7) 21771303
chr17 49013194 49016195 ZNF143 GTRD no Epithelial (MCF-7) 21771304
chr17 49013195 49015334 TCF7L2 GTRD no Colon (HCT116) 21771305
chr17 49013195 49015944 TCF7L2 GTRD no Colon (HCT116) 21771306
chr17 49013203 49015168 ZNF143 GTRD no Epithelial (MCF-7) 21771307
chr17 49013233 49015235 ZNF143 GTRD no Epithelial (MCF-7) 21771308
chr17 49013233 49015235 ZNF143 GTRD no Epithelial (MCF-7) 21771309
chr17 49013238 49015440 TCF7L2 GTRD no Colon (HCT116) 21771310
chr17 49013253 49014830 SOX2 GTRD no Neural Stem Cells (H9) 21771312
chr17 49013312 49014318 SOX2 GTRD no Neural Stem Cells (H9) 21771314
chr17 49013331 49014503 SOX2 GTRD no Neural Stem Cells (H9) 21771315
chr17 49013374 49014812 ZNF274 GTRD no Bone Marrow (K562) 21771317
chr17 49013374 49015145 ZNF143 GTRD no Epithelial (MCF-7) 21771318
chr17 49013756 49015252 TCF7L2 GTRD no Colon (HCT116) 21771324
chr17 49013799 49015232 ZNF143 GTRD no Epithelial (MCF-7) 21771325
chr17 49013799 49015232 ZNF143 GTRD no Epithelial (MCF-7) 21771326
chr17 49013821 49014868 MYOD GTRD no Muscle (Myoblast) 21771327
chr17 49013881 49016117 ZNF143 GTRD no Epithelial (MCF-7) 21771328
chr17 49013881 49016117 ZNF143 GTRD no Epithelial (MCF-7) 21771329
chr17 49013883 49015251 ZNF143 GTRD no Epithelial (MCF-7) 21771330
chr17 49013883 49015251 ZNF143 GTRD no Epithelial (MCF-7) 21771331
chr17 49013890 49014416 SOX2 GTRD no Neural Stem Cells (H9) 21771332
chr17 49013895 49015234 ZNF143 GTRD no Epithelial (MCF-7) 21771333
chr17 49013895 49015234 ZNF143 GTRD no Epithelial (MCF-7) 21771334
chr17 49014035 49014842 ZNF143 GTRD no Epithelial (MCF-7) 21771335
chr17 49014047 49015112 ZNF143 GTRD no Epithelial (MCF-7) 21771336
chr17 49014084 49015098 ZNF143 GTRD no Epithelial (MCF-7) 21771337
chr17 49014117 49015066 ZNF143 GTRD no Epithelial (MCF-7) 21771338
chr17 49014117 49015155 ZNF143 GTRD no Epithelial (MCF-7) 21771339
chr17 49014175 49014196 ZNF263 JASPAR yes 54736358
chr17 49014179 49014200 ZNF263 JASPAR yes 54736359
chr17 49014187 49014198 E2F6 JASPAR yes 54736360
Genes associated with rs556657842[chr17:49014187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More