EnhancerDB
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  3. rs556662961[chr1:19737726]
Enhancers that have rs556662961[chr1:19737726]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556662961[chr1:19737726]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19737712 19737726 TCF7L2 JASPAR yes 27186926
chr1 19737712 19737727 LEF1 JASPAR yes 27186927
chr1 19737719 19737737 NR3C1 JASPAR yes 27186928
Genes associated with rs556662961[chr1:19737726], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More