EnhancerDB
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  3. rs556719080[chr16:88832076]
Enhancers that have rs556719080[chr16:88832076]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556719080[chr16:88832076]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88831649 88832296 TCF7L2 GTRD no Colon (HCT116) 21736937
chr16 88831649 88832296 TCF7L2 GTRD no Colon (HCT116) 108223391
chr16 88831653 88832606 ZNF143 GTRD no Epithelial (MCF-7) 21736938
chr16 88831653 88832606 ZNF143 GTRD no Epithelial (MCF-7) 108223392
chr16 88832070 88832091 IRF1 JASPAR yes 12301718
chr16 88832071 88832092 IRF1 JASPAR yes 12301719
chr16 88832073 88832094 IRF1 JASPAR yes 12301720
chr16 88832074 88832095 IRF1 JASPAR yes 12301721
chr16 88832075 88832090 FOXP1 JASPAR yes 12301722
chr16 88832075 88832096 IRF1 JASPAR yes 12301723
chr16 88832076 88832091 FOXP1 JASPAR yes 12301724
chr16 88832076 88832097 IRF1 JASPAR yes 12301725
Genes associated with rs556719080[chr16:88832076], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More