EnhancerDB
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  3. rs556731579[chr1:19712486]
Enhancers that have rs556731579[chr1:19712486]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556731579[chr1:19712486]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19712474 19712488 FOXF2 JASPAR yes 27183723
chr1 19712475 19712486 FOXA1 JASPAR yes 27183724
chr1 19712475 19712490 FOXA1 JASPAR yes 27183725
chr1 19712476 19712487 FOXB1 JASPAR yes 27183726
chr1 19712476 19712487 FOXC1 JASPAR yes 27183727
chr1 19712476 19712488 FOXC2 JASPAR yes 27183728
chr1 19712477 19712488 FOXP2 JASPAR yes 27183729
chr1 19712478 19712486 FOXO3 JASPAR yes 27183730
chr1 19712479 19712486 FOXD2 JASPAR yes 27183731
chr1 19712479 19712486 FOXI1 JASPAR yes 27183732
chr1 19712479 19712486 FOXL1 JASPAR yes 27183733
chr1 19712479 19712486 FOXO4 JASPAR yes 27183734
chr1 19712479 19712486 FOXO6 JASPAR yes 27183735
chr1 19712479 19712486 FOXP3 JASPAR yes 27183736
chr1 19712479 19712487 FOXD1 JASPAR yes 27183737
chr1 19712479 19712487 FOXG1 JASPAR yes 27183738
chr1 19712479 19712487 FOXO3 JASPAR yes 27183739
chr1 19712484 19712488 YY1 TRANSFAC yes 27183740
Genes associated with rs556731579[chr1:19712486], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More