EnhancerDB
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  3. rs556762906[chr3:124557453]
Enhancers that have rs556762906[chr3:124557453]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124541185 124560055 enh20881
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556762906[chr3:124557453]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124557442 124557453 HOXA10 JASPAR yes 5406198
chr3 124557442 124557453 HOXC11 JASPAR yes 5406199
chr3 124557442 124557453 HOXC12 JASPAR yes 5406200
chr3 124557442 124557453 HOXD12 JASPAR yes 5406201
chr3 124557443 124557453 HOXC10 JASPAR yes 5406203
chr3 124557443 124557453 HOXD11 JASPAR yes 5406204
chr3 124557443 124557457 POU1F1 JASPAR yes 5406205
chr3 124557452 124557467 FOXP1 JASPAR yes 5406207
chr3 124557453 124557468 FOXP1 JASPAR yes 5406208
Genes associated with rs556762906[chr3:124557453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More