EnhancerDB
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  3. rs55678491[chr17:65421399]
Enhancers that have rs55678491[chr17:65421399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65392925 65424130 enh17321
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs55678491[chr17:65421399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65421378 65421399 IRF1 JASPAR yes 55501957
chr17 65421379 65421400 ZNF263 JASPAR yes 55501958
chr17 65421394 65421400 HiNF-A TRANSFAC yes 55501959
Genes associated with rs55678491[chr17:65421399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More