EnhancerDB
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  3. rs556815159[chr1:19758536]
Enhancers that have rs556815159[chr1:19758536]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556815159[chr1:19758536]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19758533 19758548 FOXP1 JASPAR yes 27189367
chr1 19758534 19758549 FOXP1 JASPAR yes 27189368
chr1 19758535 19758550 FOXP1 JASPAR yes 27189369
chr1 19758535 19758556 IRF1 JASPAR yes 27189370
chr1 19758536 19758551 FOXP1 JASPAR yes 27189371
chr1 19758536 19758557 IRF1 JASPAR yes 27189372
Genes associated with rs556815159[chr1:19758536], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More