EnhancerDB
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  3. rs556817842[chr17:76315543]
Enhancers that have rs556817842[chr17:76315543]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76294130 76316355 enh17406
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556817842[chr17:76315543]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76314440 76315788 ZNF143 GTRD no Epithelial (MCF-7) 21793386
chr17 76314454 76315706 ZNF143 GTRD no Epithelial (MCF-7) 21793387
chr17 76314462 76315696 ZNF143 GTRD no Epithelial (MCF-7) 21793388
chr17 76314513 76315694 ZNF143 GTRD no Epithelial (MCF-7) 21793389
chr17 76314514 76315567 ZNF143 GTRD no Epithelial (MCF-7) 21793390
chr17 76314550 76315606 ZNF274 GTRD no Bone Marrow (K562) 21793392
chr17 76314602 76315544 ZNF143 GTRD no Epithelial (MCF-7) 21793399
chr17 76314659 76315591 ZNF143 GTRD no Epithelial (MCF-7) 21793401
chr17 76314678 76315556 ZBTB33 GTRD no Brain (SK-N-SH) 21793404
chr17 76315530 76315544 GLIS2 JASPAR yes 56146365
chr17 76315530 76315544 ZIC1 JASPAR yes 56146366
chr17 76315530 76315545 ZIC3 JASPAR yes 56146367
chr17 76315530 76315545 ZIC4 JASPAR yes 56146368
chr17 76315540 76315553 NR2F1 JASPAR yes 56146370
chr17 76315543 76315558 HNF4A JASPAR yes 56146371
Genes associated with rs556817842[chr17:76315543], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More