EnhancerDB
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  3. rs556859612[chr12:109231997]
Enhancers that have rs556859612[chr12:109231997]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109230004 109245900 enh14979
Bone Marrow (K562) Brain (SK-N-MC) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556859612[chr12:109231997]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109231069 109232687 POLR2A UCSC Txn Factor no Conserved 108057682
chr12 109231720 109232316 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21571786
chr12 109231720 109232316 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108057683
chr12 109231720 109232607 TCF7L2 UCSC Txn Factor no Conserved 108057684
chr12 109231814 109232250 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108057685
chr12 109231876 109232376 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571787
chr12 109231876 109232376 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057686
chr12 109231888 109232492 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571788
chr12 109231888 109232492 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057687
chr12 109231908 109232412 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571789
chr12 109231908 109232412 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057688
chr12 109231914 109232648 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571790
chr12 109231914 109232648 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057689
chr12 109231959 109232643 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571791
chr12 109231959 109232643 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057690
chr12 109231986 109232562 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571792
chr12 109231986 109232562 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057691
chr12 109231986 109232646 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571793
chr12 109231986 109232646 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057692
chr12 109231988 109232344 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571794
chr12 109231988 109232344 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057693
chr12 109231990 109232001 NFE2L2 JASPAR yes 123625356
chr12 109231990 109232005 HNF4G JASPAR yes 123625357
chr12 109231991 109232301 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21571795
chr12 109231991 109232301 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108057694
chr12 109231995 109232571 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108057695
chr12 109231997 109232011 RXRB JASPAR yes 123625358
chr12 109231997 109232011 RXRG JASPAR yes 123625359
chr12 109231997 109232012 HNF4G JASPAR yes 123625360
chr12 109231997 109232012 LEF1 JASPAR yes 123625361
chr12 109231997 109232012 NR2C2 JASPAR yes 123625362
Genes associated with rs556859612[chr12:109231997], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More