EnhancerDB
  1. Home
  2. SNP
  3. rs556862350[chr10:29878421]
Enhancers that have rs556862350[chr10:29878421]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 29869734 29882850 enh13093
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556862350[chr10:29878421]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 29878407 29878422 MEF2C JASPAR yes 126328620
chr10 29878408 29878421 POU3F3 JASPAR yes 126328621
chr10 29878408 29878422 POU1F1 JASPAR yes 126328622
chr10 29878409 29878421 POU3F1 JASPAR yes 126328623
chr10 29878409 29878421 POU3F2 JASPAR yes 126328624
chr10 29878412 29878422 HOXC10 JASPAR yes 126328626
chr10 29878412 29878422 HOXD11 JASPAR yes 126328627
chr10 29878412 29878423 HOXA10 JASPAR yes 126328628
chr10 29878412 29878423 HOXC11 JASPAR yes 126328629
chr10 29878414 29878422 NKX6-1 JASPAR yes 126328630
Genes associated with rs556862350[chr10:29878421], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More