EnhancerDB
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  3. rs556874808[chr5:173204270]
Enhancers that have rs556874808[chr5:173204270]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556874808[chr5:173204270]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173204261 173204274 NR2F1 JASPAR yes 67903705
chr5 173204263 173204274 ESRRA JASPAR yes 67903706
chr5 173204266 173204281 TFAP2A JASPAR yes 67903707
chr5 173204266 173204281 TFAP2C JASPAR yes 67903708
chr5 173204268 173204277 TFAP2A JASPAR yes 67903709
Genes associated with rs556874808[chr5:173204270], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More