EnhancerDB
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  3. rs556959170[chr1:19781553]
Enhancers that have rs556959170[chr1:19781553]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556959170[chr1:19781553]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19781537 19781558 ZNF263 JASPAR yes 27192656
chr1 19781547 19781560 TFAP2A JASPAR yes 27192657
chr1 19781547 19781560 TFAP2B JASPAR yes 27192658
chr1 19781547 19781560 TFAP2C JASPAR yes 27192659
chr1 19781548 19781557 TFAP2A JASPAR yes 27192660
Genes associated with rs556959170[chr1:19781553], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More