EnhancerDB
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  3. rs55702639[chr6:30804958]
Enhancers that have rs55702639[chr6:30804958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55702639[chr6:30804958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30804939 30804958 PAX5 JASPAR yes 101057346
chr6 30804948 30804963 HNF1A JASPAR yes 101057347
chr6 30804949 30804962 HNF1B JASPAR yes 101057348
Genes associated with rs55702639[chr6:30804958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More