EnhancerDB
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  3. rs557052916[chr12:122588243]
Enhancers that have rs557052916[chr12:122588243]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122578829 122604895 enh2657
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs557052916[chr12:122588243]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122588235 122588256 IRF1 JASPAR yes 124266085
chr12 122588236 122588251 FOXP1 JASPAR yes 124266086
chr12 122588236 122588257 IRF1 JASPAR yes 124266087
chr12 122588239 122588243 YY1 TRANSFAC yes 124266088
chr12 122588240 122588255 FOXP1 JASPAR yes 124266089
chr12 122588241 122588256 FOXP1 JASPAR yes 124266090
chr12 122588242 122588257 FOXP1 JASPAR yes 124266091
chr12 122588243 122588258 FOXP1 JASPAR yes 124266092
Genes associated with rs557052916[chr12:122588243], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More