EnhancerDB
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  3. rs557074331[chr2:232538175]
Enhancers that have rs557074331[chr2:232538175]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs557074331[chr2:232538175]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232535800 232538649 POLR2A UCSC Txn Factor no Conserved 108435737
chr2 232535800 232538649 POLR2A UCSC Txn Factor no Conserved 108435738
chr2 232535800 232538649 POLR2A UCSC Txn Factor no Conserved 108435739
chr2 232537598 232538195 TFAP2A UCSC Txn Factor no Conserved 108435744
chr2 232538166 232538179 NFKB1 JASPAR yes 81734777
chr2 232538166 232538179 NFKB2 JASPAR yes 81734778
chr2 232538167 232538177 NFKB1 JASPAR yes 81734779
chr2 232538167 232538177 RELA JASPAR yes 81734780
chr2 232538167 232538178 NFKB1 JASPAR yes 81734781
Genes associated with rs557074331[chr2:232538175], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More